/* Copyright (c) 2006, 2007, The Cytoscape Consortium (www.cytoscape.org) The Cytoscape Consortium is: - Institute for Systems Biology - University of California San Diego - Memorial Sloan-Kettering Cancer Center - Institut Pasteur - Agilent Technologies This library is free software; you can redistribute it and/or modify it under the terms of the GNU Lesser General Public License as published by the Free Software Foundation; either version 2.1 of the License, or any later version. This library is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY, WITHOUT EVEN THE IMPLIED WARRANTY OF MERCHANTABILITY OR FITNESS FOR A PARTICULAR PURPOSE. The software and documentation provided hereunder is on an "as is" basis, and the Institute for Systems Biology and the Whitehead Institute have no obligations to provide maintenance, support, updates, enhancements or modifications. In no event shall the Institute for Systems Biology and the Whitehead Institute be liable to any party for direct, indirect, special, incidental or consequential damages, including lost profits, arising out of the use of this software and its documentation, even if the Institute for Systems Biology and the Whitehead Institute have been advised of the possibility of such damage. See the GNU Lesser General Public License for more details. You should have received a copy of the GNU Lesser General Public License along with this library; if not, write to the Free Software Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA. */ package cytoscape.visual.ui; import java.awt.BasicStroke; import java.awt.Color; import java.awt.Component; import java.awt.Dimension; import java.awt.Font; import java.awt.Frame; import java.awt.Graphics; import java.awt.Graphics2D; import java.awt.event.ActionEvent; import java.awt.event.ActionListener; import java.awt.event.ComponentAdapter; import java.awt.event.ComponentEvent; import java.awt.event.MouseAdapter; import java.awt.event.MouseEvent; import java.util.ArrayList; import java.util.HashMap; import java.util.List; import java.util.Map; import java.util.Set; import java.util.TreeSet; import javax.swing.BorderFactory; import javax.swing.BoxLayout; import javax.swing.DefaultListModel; import javax.swing.Icon; import javax.swing.JButton; import javax.swing.JCheckBox; import javax.swing.JDialog; import javax.swing.JLabel; import javax.swing.JList; import javax.swing.JPanel; import javax.swing.JScrollPane; import javax.swing.JTabbedPane; import javax.swing.ListCellRenderer; import javax.swing.SwingConstants; import javax.swing.WindowConstants; import javax.swing.border.LineBorder; import org.jdesktop.swingx.JXList; import org.jdesktop.swingx.border.DropShadowBorder; import cytoscape.Cytoscape; import cytoscape.logger.CyLogger; import cytoscape.util.CyColorChooser; import cytoscape.visual.GlobalAppearanceCalculator; import cytoscape.visual.VisualPropertyDependency; import cytoscape.visual.VisualPropertyType; import cytoscape.visual.VisualPropertyDependency.Definition; import cytoscape.visual.ui.icon.VisualPropertyIcon; /** * Dialog for editing default visual property values.
* This is a modal dialog. * *

* Basic idea is the following: *

*

* * @version 0.5 * @since Cytoscape 2.5 * @author kono */ public class DefaultAppearenceBuilder extends JDialog { private static final long serialVersionUID = 596165395462496156L; // Default dialog size for Default Appearence Builder. private static final int VIEW_WIDTH = 350; private static final int LIST_WIDTH = 550; private static final Dimension DIALOG_SIZE = new Dimension(900, 500); private static final Set EDGE_PROPS; private static final Set NODE_PROPS; private static final CyLogger logger = CyLogger.getLogger(DefaultAppearenceBuilder.class); // This editor should be a singleton. private static DefaultAppearenceBuilder dab = null; static { EDGE_PROPS = new TreeSet(VisualPropertyType.getEdgeVisualPropertyList()); NODE_PROPS = new TreeSet(VisualPropertyType.getNodeVisualPropertyList()); } /** * Creates a new DefaultAppearenceBuilder object. * * @param parent DOCUMENT ME! * @param modal DOCUMENT ME! */ private DefaultAppearenceBuilder(final Frame parent, final boolean modal) { super(parent, modal); initComponents(); buildList(); this.addComponentListener(new ComponentAdapter() { public void componentResized(ComponentEvent e) { mainView.updateView(); } }); } /** * DOCUMENT ME! * * @param parent DOCUMENT ME! * * @return DOCUMENT ME! */ static JPanel showDialog(Frame parent) { if (dab == null) dab = new DefaultAppearenceBuilder(parent, true); dab.setSize(DIALOG_SIZE); dab.buildList(); dab.mainView.updateView(); dab.setLocationRelativeTo(parent); dab.setVisible(true); return dab.getPanel(); } /** * DOCUMENT ME! * * @return DOCUMENT ME! */ static final JPanel getDefaultView(String vsName) { if (dab == null) dab = new DefaultAppearenceBuilder(Cytoscape.getDesktop(), true); dab.mainView.updateBackgroungColor(Cytoscape.getVisualMappingManager().getVisualStyle() .getGlobalAppearanceCalculator() .getDefaultBackgroundColor()); dab.buildList(); return dab.getPanel(); } /** * This method is called from within the constructor to initialize the form. * WARNING: Do NOT modify this code. The content of this method is always * regenerated by the Form Editor. */ // private void initComponents() { jXPanel1 = new org.jdesktop.swingx.JXPanel(); mainView = DefaultViewPanel.getDefaultViewPanel(); jXTitledPanel1 = new org.jdesktop.swingx.JXTitledPanel(); defaultObjectTabbedPane = new JTabbedPane(); nodeScrollPane = new JScrollPane(); edgeScrollPane = new JScrollPane(); globalScrollPane = new JScrollPane(); dependencyScrollPane = new JScrollPane(); nodeList = new JXList(); edgeList = new JXList(); globalList = new JXList(); initDependencyPanel(); applyButton = new JButton(); cancelButton = new JButton(); cancelButton.setVisible(false); nodeList.addMouseListener(new MouseAdapter() { public void mouseClicked(MouseEvent e) { listActionPerformed(e); } }); edgeList.addMouseListener(new MouseAdapter() { public void mouseClicked(MouseEvent e) { listActionPerformed(e); } }); globalList.addMouseListener(new MouseAdapter() { public void mouseClicked(MouseEvent e) { globalListActionPerformed(e); } }); setDefaultCloseOperation(WindowConstants.DISPOSE_ON_CLOSE); setTitle("Default Appearance for " + Cytoscape.getVisualMappingManager().getVisualStyle().getName()); mainView.setPreferredSize(new Dimension(VIEW_WIDTH, 300)); mainView.setBorder(new LineBorder(Color.darkGray, 1, true)); org.jdesktop.layout.GroupLayout jXPanel2Layout = new org.jdesktop.layout.GroupLayout(mainView); mainView.setLayout(jXPanel2Layout); jXPanel2Layout.setHorizontalGroup(jXPanel2Layout.createParallelGroup(org.jdesktop.layout.GroupLayout.LEADING) .add(0, 300, Short.MAX_VALUE)); jXPanel2Layout.setVerticalGroup(jXPanel2Layout.createParallelGroup(org.jdesktop.layout.GroupLayout.LEADING) .add(0, 237, Short.MAX_VALUE)); jXTitledPanel1.setTitle("Default Visual Properties"); jXTitledPanel1.setTitleFont(new Font("SansSerif", Font.BOLD, 12)); jXTitledPanel1.setPreferredSize(new Dimension(LIST_WIDTH, 300)); defaultObjectTabbedPane.setTabPlacement(JTabbedPane.BOTTOM); nodeScrollPane.setViewportView(nodeList); edgeScrollPane.setViewportView(edgeList); globalScrollPane.setViewportView(globalList); dependencyScrollPane.setViewportView(dependencyPanel); defaultObjectTabbedPane.addTab("Node", nodeScrollPane); defaultObjectTabbedPane.addTab("Edge", edgeScrollPane); defaultObjectTabbedPane.addTab("Global", globalScrollPane); defaultObjectTabbedPane.addTab("Dependencies", dependencyScrollPane); org.jdesktop.layout.GroupLayout jXTitledPanel1Layout = new org.jdesktop.layout.GroupLayout(jXTitledPanel1 .getContentContainer()); jXTitledPanel1.getContentContainer().setLayout(jXTitledPanel1Layout); jXTitledPanel1Layout.setHorizontalGroup(jXTitledPanel1Layout.createParallelGroup(org.jdesktop.layout.GroupLayout.LEADING) .add(defaultObjectTabbedPane, org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, 250, Short.MAX_VALUE)); jXTitledPanel1Layout.setVerticalGroup(jXTitledPanel1Layout.createParallelGroup(org.jdesktop.layout.GroupLayout.LEADING) .add(defaultObjectTabbedPane, org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, 243, Short.MAX_VALUE)); applyButton.setText("Apply"); applyButton.addActionListener(new ActionListener() { public void actionPerformed(ActionEvent arg0) { Cytoscape.getVisualMappingManager() .setNetworkView(Cytoscape.getCurrentNetworkView()); Cytoscape.getCurrentNetworkView().redrawGraph(false, true); dispose(); } }); cancelButton.setText("Cancel"); cancelButton.addActionListener(new ActionListener() { public void actionPerformed(ActionEvent arg0) { dispose(); } }); org.jdesktop.layout.GroupLayout jXPanel1Layout = new org.jdesktop.layout.GroupLayout(jXPanel1); jXPanel1.setLayout(jXPanel1Layout); jXPanel1Layout.setHorizontalGroup(jXPanel1Layout.createParallelGroup(org.jdesktop.layout.GroupLayout.LEADING) .add(jXPanel1Layout.createSequentialGroup() .addContainerGap() .add(jXPanel1Layout.createParallelGroup(org.jdesktop.layout.GroupLayout.LEADING) .add(jXPanel1Layout.createSequentialGroup() .addPreferredGap(org.jdesktop.layout.LayoutStyle.RELATED) .add(cancelButton) .addPreferredGap(org.jdesktop.layout.LayoutStyle.RELATED) .add(applyButton)) .add(mainView, org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)) .addPreferredGap(org.jdesktop.layout.LayoutStyle.RELATED) .add(jXTitledPanel1, org.jdesktop.layout.GroupLayout.PREFERRED_SIZE, 500, Short.MAX_VALUE) .add(12, 12, 12))); jXPanel1Layout.setVerticalGroup(jXPanel1Layout.createParallelGroup(org.jdesktop.layout.GroupLayout.LEADING) .add(org.jdesktop.layout.GroupLayout.TRAILING, jXPanel1Layout.createSequentialGroup() .addContainerGap() .add(jXPanel1Layout.createParallelGroup(org.jdesktop.layout.GroupLayout.TRAILING) .add(org.jdesktop.layout.GroupLayout.LEADING, jXTitledPanel1, org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, 270, Short.MAX_VALUE) .add(jXPanel1Layout.createSequentialGroup() .add(mainView, org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE) .addPreferredGap(org.jdesktop.layout.LayoutStyle.RELATED) .add(jXPanel1Layout.createParallelGroup(org.jdesktop.layout.GroupLayout.BASELINE) .add(cancelButton) .add(applyButton)))) .addContainerGap())); this.getContentPane().add(jXPanel1); pack(); } // private void listActionPerformed(MouseEvent e) { if (e.getClickCount() == 1) { Object newValue = null; final JList list; if (e.getSource() == nodeList) { list = nodeList; } else { list = edgeList; } try { newValue = VizMapperMainPanel.showValueSelectDialog((VisualPropertyType) list.getSelectedValue(), this); VizMapperMainPanel.apply(newValue, (VisualPropertyType) list.getSelectedValue()); } catch (Exception e1) { logger.warn("Unable to show VizMapper value select dialog!", e1); e1.printStackTrace(); } buildList(); Cytoscape.getCurrentNetworkView().redrawGraph(false, true); } } private void globalListActionPerformed(MouseEvent e) { if (e.getClickCount() == 1) { final String selected = (String) globalList.getSelectedValue(); Color newColor = CyColorChooser.showDialog(this, "Choose new color.", Color.white); try { Cytoscape.getVisualMappingManager().getVisualStyle().getGlobalAppearanceCalculator() .setDefaultColor(selected, newColor); Cytoscape.getVisualMappingManager().applyGlobalAppearances(); } catch (Exception e1) { logger.warn("Unable to set default color!", e1); } buildList(); Cytoscape.getVisualMappingManager().getNetworkView().redrawGraph(false, true); if (selected.equals("Background Color")) { Cytoscape.getVisualMappingManager().applyGlobalAppearances(); mainView.updateBackgroungColor(newColor); } mainView.updateView(); mainView.repaint(); } } // Variables declaration - do not modify private JButton applyButton; private JButton cancelButton; private JScrollPane nodeScrollPane; private JScrollPane edgeScrollPane; private JScrollPane globalScrollPane; private JScrollPane dependencyScrollPane; private JTabbedPane defaultObjectTabbedPane; private JXList nodeList; private JXList edgeList; private JXList globalList; private JPanel dependencyPanel; private org.jdesktop.swingx.JXPanel jXPanel1; private Map dependencyCheckBoxMap; // private org.jdesktop.swingx.JXPanel jXPanel2; private org.jdesktop.swingx.JXTitledPanel jXTitledPanel1; // End of variables declaration protected DefaultViewPanel mainView; // End of variables declaration private JPanel getPanel() { return mainView; } /** * DOCUMENT ME! */ private void buildList() { syncDependencies(); List nodeIcons = new ArrayList(); List edgeIcons = new ArrayList(); List globalIcons = new ArrayList(); DefaultListModel model = new DefaultListModel(); nodeList.setModel(model); for (VisualPropertyType type : NODE_PROPS) { final VisualPropertyIcon nodeIcon = (VisualPropertyIcon) (type.getVisualProperty() .getDefaultIcon()); nodeIcon.setLeftPadding(15); model.addElement(type); nodeIcons.add(nodeIcon); } DefaultListModel eModel = new DefaultListModel(); edgeList.setModel(eModel); for (VisualPropertyType type : EDGE_PROPS) { final VisualPropertyIcon edgeIcon = (VisualPropertyIcon) (type.getVisualProperty() .getDefaultIcon()); if (edgeIcon != null) { edgeIcon.setLeftPadding(15); eModel.addElement(type); edgeIcons.add(edgeIcon); } } GlobalAppearanceCalculator gac = Cytoscape.getVisualMappingManager().getVisualStyle() .getGlobalAppearanceCalculator(); DefaultListModel gModel = new DefaultListModel(); globalList.setModel(gModel); for (String name : gac.getGlobalAppearanceNames()) { try { globalIcons.add(new GlobalIcon(name, gac.getDefaultColor(name))); } catch (Exception e) { logger.warn("Unable to add default color icon!", e); } gModel.addElement(name); } nodeList.setCellRenderer(new VisualPropCellRenderer(nodeIcons)); edgeList.setCellRenderer(new VisualPropCellRenderer(edgeIcons)); globalList.setCellRenderer(new VisualPropCellRenderer(globalIcons)); mainView.updateView(); mainView.repaint(); } private void syncDependencies() { final VisualPropertyDependency dep = Cytoscape.getVisualMappingManager().getVisualStyle().getDependency(); // sync properties with dependencies for ( VisualPropertyType type : VisualPropertyType.values() ) { if ( !type.isAllowed() ) continue; if ( type.isNodeProp() ) { if ( type.getVisualProperty().constrained(dep) ) NODE_PROPS.remove(type); else NODE_PROPS.add(type); } else { if ( type.getVisualProperty().constrained(dep) ) EDGE_PROPS.remove(type); else EDGE_PROPS.add(type); } } // apply dependencies to checkboxes for ( Definition def : dependencyCheckBoxMap.keySet() ) dependencyCheckBoxMap.get(def).setSelected( dep.check( def ) ); } private void initDependencyPanel() { dependencyPanel = new JPanel(); dependencyCheckBoxMap = new HashMap(); dependencyPanel.setLayout(new BoxLayout(dependencyPanel, BoxLayout.Y_AXIS)); final VisualPropertyDependency dep = Cytoscape.getVisualMappingManager().getVisualStyle().getDependency(); for (final Definition def : Definition.values()) { final JCheckBox dCheck = new JCheckBox(); dCheck.setSelected( dep.check( def ) ); dCheck.setFont(new java.awt.Font("SansSerif", 1, 12)); dCheck.setText(def.getTitle()); dCheck.setBorder(BorderFactory.createEmptyBorder(0, 0, 0, 0)); dCheck.setMargin(new java.awt.Insets(0, 0, 0, 0)); dependencyPanel.add(dCheck); dependencyCheckBoxMap.put(def,dCheck); dCheck.addActionListener(new ActionListener() { public void actionPerformed(ActionEvent arg0) { final VisualPropertyDependency deps = Cytoscape.getVisualMappingManager().getVisualStyle().getDependency(); deps.set(def,dCheck.isSelected()); Cytoscape.getDesktop().getVizMapperUI().syncDependencyStates(deps,def); buildList(); mainView.updateView(); repaint(); } }); } } static class VisualPropCellRenderer extends JLabel implements ListCellRenderer { private static final long serialVersionUID = -4980971466313937239L; private final Font SELECTED_FONT = new Font("SansSerif", Font.ITALIC, 14); private final Font NORMAL_FONT = new Font("SansSerif", Font.BOLD, 12); private final Color SELECTED_COLOR = new Color(10, 50, 180, 20); private final Color SELECTED_FONT_COLOR = new Color(0, 150, 255, 150); private final List icons; public VisualPropCellRenderer(List icons) { this.icons = icons; setOpaque(true); } public Component getListCellRendererComponent(JList list, Object value, int index, boolean isSelected, boolean cellHasFocus) { final VisualPropertyIcon icon; if (icons.size() > index) { icon = (VisualPropertyIcon) icons.get(index); } else icon = null; setText(value.toString()); setIcon(icon); setFont(isSelected ? SELECTED_FONT : NORMAL_FONT); this.setVerticalTextPosition(SwingConstants.CENTER); this.setVerticalAlignment(SwingConstants.CENTER); this.setIconTextGap(120); if (value instanceof VisualPropertyType && (((VisualPropertyType) value).getDataType() == String.class)) { final Object defVal = ((VisualPropertyType) value).getDefault(Cytoscape.getVisualMappingManager() .getVisualStyle()); if (defVal != null) { this.setToolTipText((String) defVal); } } setBackground(isSelected ? SELECTED_COLOR : list.getBackground()); setForeground(isSelected ? SELECTED_FONT_COLOR : list.getForeground()); if (icon != null) { setPreferredSize(new Dimension(icon.getIconWidth(), icon.getIconHeight() + 12)); } this.setBorder(new DropShadowBorder()); return this; } } /* * Draw global color icon */ static class GlobalIcon extends VisualPropertyIcon { private static final long serialVersionUID = -2292185584380604923L; public GlobalIcon(String name, Color color) { super(name, color); } public void paintIcon(Component c, Graphics g, int x, int y) { Graphics2D g2d = (Graphics2D) g; g2d.setColor(color); g2d.fillRect(5, 3, 50, 32); g2d.setStroke(new BasicStroke(1f)); g2d.setColor(Color.DARK_GRAY); g2d.drawRect(5, 3, 50, 32); } } }